Whole Exome Sequencing (WES) Analysis (Index) Prenatal Diagnosis

Definition

This is an exome analysis performed in pregnancies with a detected fetal structural anomaly where chromosomal microarray/karyotype results are non-diagnostic; in systematic reviews, additional diagnostic yield in CMA/karyotype-negative cases was found to be 31%. Diagnostic yield varies greatly by phenotype, reaching up to 53% in isolated skeletal anomalies.

Method

Next-Generation Sequencing

Accepted sample types

EDTA Blood, Amniocentesis, Cordocentesis, CVS

Description

Analyzes exons and exon-intron junction regions belonging to ~22,000 gene regions. A maternal contamination test is included. Investigates gene-level changes of unknown cause. Analysis depth is 100X coverage.

Inheritance

Studied in a germline context, hereditary/de novo variants are searched for in fetal DNA.

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